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Papers/Early hospital mortality prediction using vital signals

Early hospital mortality prediction using vital signals

Reza Sadeghi, Tanvi Banerjee, William Romine

2018-03-18Mortality PredictionPrediction
PaperPDFCode(official)

Abstract

Early hospital mortality prediction is critical as intensivists strive to make efficient medical decisions about the severely ill patients staying in intensive care units. As a result, various methods have been developed to address this problem based on clinical records. However, some of the laboratory test results are time-consuming and need to be processed. In this paper, we propose a novel method to predict mortality using features extracted from the heart signals of patients within the first hour of ICU admission. In order to predict the risk, quantitative features have been computed based on the heart rate signals of ICU patients. Each signal is described in terms of 12 statistical and signal-based features. The extracted features are fed into eight classifiers: decision tree, linear discriminant, logistic regression, support vector machine (SVM), random forest, boosted trees, Gaussian SVM, and K-nearest neighborhood (K-NN). To derive insight into the performance of the proposed method, several experiments have been conducted using the well-known clinical dataset named Medical Information Mart for Intensive Care III (MIMIC-III). The experimental results demonstrate the capability of the proposed method in terms of precision, recall, F1-score, and area under the receiver operating characteristic curve (AUC). The decision tree classifier satisfies both accuracy and interpretability better than the other classifiers, producing an F1-score and AUC equal to 0.91 and 0.93, respectively. It indicates that heart rate signals can be used for predicting mortality in patients in the ICU, achieving a comparable performance with existing predictions that rely on high dimensional features from clinical records which need to be processed and may contain missing information.

Results

TaskDatasetMetricValueModel
Electrocardiography (ECG)MIMIC-IIIF1 score0.97Random Forest
Electrocardiography (ECG)MIMIC-IIIPrecision0.97Random Forest
Electrocardiography (ECG)MIMIC-IIIRecall0.97Random Forest
Electrocardiography (ECG)MIMIC-IIIF1 score0.96Gaussian SVM
Electrocardiography (ECG)MIMIC-IIIPrecision0.95Gaussian SVM
Electrocardiography (ECG)MIMIC-IIIRecall0.96Gaussian SVM
Electrocardiography (ECG)MIMIC-IIIF1 score0.91Decision Tree
Electrocardiography (ECG)MIMIC-IIIPrecision0.9Decision Tree
Electrocardiography (ECG)MIMIC-IIIRecall0.92Decision Tree
Electrocardiography (ECG)MIMIC-IIIF1 score0.87Boosted Trees
Electrocardiography (ECG)MIMIC-IIIPrecision0.91Boosted Trees
Electrocardiography (ECG)MIMIC-IIIRecall0.83Boosted Trees
Electrocardiography (ECG)MIMIC-IIIF1 score0.82K-NN
Electrocardiography (ECG)MIMIC-IIIPrecision0.8K-NN
Electrocardiography (ECG)MIMIC-IIIRecall0.85K-NN
Electrocardiography (ECG)MIMIC-IIIF1 score0.72Logistic regression
Electrocardiography (ECG)MIMIC-IIIPrecision0.77Logistic regression
Electrocardiography (ECG)MIMIC-IIIRecall0.67Logistic regression
Electrocardiography (ECG)MIMIC-IIIF1 score0.71Linear Discriminant
Electrocardiography (ECG)MIMIC-IIIPrecision0.78Linear Discriminant
Electrocardiography (ECG)MIMIC-IIIRecall0.66Linear Discriminant
Electrocardiography (ECG)MIMIC-IIIF1 score0.7Linear SVM
Electrocardiography (ECG)MIMIC-IIIPrecision0.8Linear SVM
Electrocardiography (ECG)MIMIC-IIIRecall0.63Linear SVM
Mortality PredictionMIMIC-IIIF1 score0.97Random Forest
Mortality PredictionMIMIC-IIIPrecision0.97Random Forest
Mortality PredictionMIMIC-IIIRecall0.97Random Forest
Mortality PredictionMIMIC-IIIF1 score0.96Gaussian SVM
Mortality PredictionMIMIC-IIIPrecision0.95Gaussian SVM
Mortality PredictionMIMIC-IIIRecall0.96Gaussian SVM
Mortality PredictionMIMIC-IIIF1 score0.91Decision Tree
Mortality PredictionMIMIC-IIIPrecision0.9Decision Tree
Mortality PredictionMIMIC-IIIRecall0.92Decision Tree
Mortality PredictionMIMIC-IIIF1 score0.87Boosted Trees
Mortality PredictionMIMIC-IIIPrecision0.91Boosted Trees
Mortality PredictionMIMIC-IIIRecall0.83Boosted Trees
Mortality PredictionMIMIC-IIIF1 score0.82K-NN
Mortality PredictionMIMIC-IIIPrecision0.8K-NN
Mortality PredictionMIMIC-IIIRecall0.85K-NN
Mortality PredictionMIMIC-IIIF1 score0.72Logistic regression
Mortality PredictionMIMIC-IIIPrecision0.77Logistic regression
Mortality PredictionMIMIC-IIIRecall0.67Logistic regression
Mortality PredictionMIMIC-IIIF1 score0.71Linear Discriminant
Mortality PredictionMIMIC-IIIPrecision0.78Linear Discriminant
Mortality PredictionMIMIC-IIIRecall0.66Linear Discriminant
Mortality PredictionMIMIC-IIIF1 score0.7Linear SVM
Mortality PredictionMIMIC-IIIPrecision0.8Linear SVM
Mortality PredictionMIMIC-IIIRecall0.63Linear SVM
ClassificationCoordinated Reply Attacks in Influence Operations: Characterization and DetectionAUC0.97Random Forest
Medical waveform analysisMIMIC-IIIF1 score0.97Random Forest
Medical waveform analysisMIMIC-IIIPrecision0.97Random Forest
Medical waveform analysisMIMIC-IIIRecall0.97Random Forest
Medical waveform analysisMIMIC-IIIF1 score0.96Gaussian SVM
Medical waveform analysisMIMIC-IIIPrecision0.95Gaussian SVM
Medical waveform analysisMIMIC-IIIRecall0.96Gaussian SVM
Medical waveform analysisMIMIC-IIIF1 score0.91Decision Tree
Medical waveform analysisMIMIC-IIIPrecision0.9Decision Tree
Medical waveform analysisMIMIC-IIIRecall0.92Decision Tree
Medical waveform analysisMIMIC-IIIF1 score0.87Boosted Trees
Medical waveform analysisMIMIC-IIIPrecision0.91Boosted Trees
Medical waveform analysisMIMIC-IIIRecall0.83Boosted Trees
Medical waveform analysisMIMIC-IIIF1 score0.82K-NN
Medical waveform analysisMIMIC-IIIPrecision0.8K-NN
Medical waveform analysisMIMIC-IIIRecall0.85K-NN
Medical waveform analysisMIMIC-IIIF1 score0.72Logistic regression
Medical waveform analysisMIMIC-IIIPrecision0.77Logistic regression
Medical waveform analysisMIMIC-IIIRecall0.67Logistic regression
Medical waveform analysisMIMIC-IIIF1 score0.71Linear Discriminant
Medical waveform analysisMIMIC-IIIPrecision0.78Linear Discriminant
Medical waveform analysisMIMIC-IIIRecall0.66Linear Discriminant
Medical waveform analysisMIMIC-IIIF1 score0.7Linear SVM
Medical waveform analysisMIMIC-IIIPrecision0.8Linear SVM
Medical waveform analysisMIMIC-IIIRecall0.63Linear SVM

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