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Papers/FANet: A Feedback Attention Network for Improved Biomedica...

FANet: A Feedback Attention Network for Improved Biomedical Image Segmentation

Nikhil Kumar Tomar, Debesh Jha, Michael A. Riegler, Håvard D. Johansen, Dag Johansen, Jens Rittscher, Pål Halvorsen, Sharib Ali

2021-03-31Semantic SegmentationMedical Image SegmentationImage Segmentation
PaperPDFCode(official)

Abstract

The increase of available large clinical and experimental datasets has contributed to a substantial amount of important contributions in the area of biomedical image analysis. Image segmentation, which is crucial for any quantitative analysis, has especially attracted attention. Recent hardware advancement has led to the success of deep learning approaches. However, although deep learning models are being trained on large datasets, existing methods do not use the information from different learning epochs effectively. In this work, we leverage the information of each training epoch to prune the prediction maps of the subsequent epochs. We propose a novel architecture called feedback attention network (FANet) that unifies the previous epoch mask with the feature map of the current training epoch. The previous epoch mask is then used to provide a hard attention to the learned feature maps at different convolutional layers. The network also allows to rectify the predictions in an iterative fashion during the test time. We show that our proposed \textit{feedback attention} model provides a substantial improvement on most segmentation metrics tested on seven publicly available biomedical imaging datasets demonstrating the effectiveness of FANet. The source code is available at \url{https://github.com/nikhilroxtomar/FANet}.

Results

TaskDatasetMetricValueModel
Medical Image SegmentationKvasir-SEGAverage MAE0.8153FANet
Medical Image SegmentationKvasir-SEGmean Dice0.8803FANet
Medical Image SegmentationISIC 2018 DSC87.31FANet
Medical Image SegmentationEMDSC0.9547FANet
Medical Image SegmentationEMIoU0.9134FANet
Medical Image SegmentationEMPrecision0.9529FANet
Medical Image SegmentationEMRecall0.9568FANet
Medical Image SegmentationEMSpecificity0.8096FANet
Medical Image Segmentation2018 Data Science BowlDice0.9176FANet
Medical Image Segmentation2018 Data Science BowlPrecision0.9194FANet
Medical Image Segmentation2018 Data Science BowlRecall0.9222FANet
Medical Image Segmentation2018 Data Science BowlmIoU0.8569FANet
Medical Image SegmentationCVC-ClinicDBmean Dice0.9355FANet
Medical Image SegmentationCHASE_DB1DSC0.8108FANet
Medical Image SegmentationDRIVEF1 score0.8183FANet
Medical Image SegmentationDRIVEPrecision0.8189FANet
Medical Image SegmentationDRIVERecall0.8215FANet
Medical Image SegmentationDRIVESpecificity0.9826FANet
Medical Image SegmentationDRIVEmIoU0.6927FANet

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