395 machine learning datasets
395 dataset results
The ISIC 2018 dataset was published by the International Skin Imaging Collaboration (ISIC) as a large-scale dataset of dermoscopy images. The Task 3 dataset is the challenge on lesion classification. It includes 2594 images. The task is to classify the dermoscopic images into one of the following categories: melanoma, melanocytic nevus, basal cell carcinoma, actinic keratosis / Bowen’s disease, benign keratosis, dermatofibroma, and vascular lesion.
BCN_20000 is a dataset composed of 19,424 dermoscopic images of skin lesions captured from 2010 to 2016 in the facilities of the Hospital Clínic in Barcelona. The dataset can be used for lesion recognition tasks such as lesion segmentation, lesion detection and lesion classification.
The Breast Cancer Histopathological Image Classification (BreakHis) is composed of 9,109 microscopic images of breast tumor tissue collected from 82 patients using different magnifying factors (40X, 100X, 200X, and 400X). It contains 2,480 benign and 5,429 malignant samples (700X460 pixels, 3-channel RGB, 8-bit depth in each channel, PNG format). This database has been built in collaboration with the P&D Laboratory - Pathological Anatomy and Cytopathology, Parana, Brazil.
ARCH is a computational pathology (CP) multiple instance captioning dataset to facilitate dense supervision of CP tasks. Existing CP datasets focus on narrow tasks; ARCH on the other hand contains dense diagnostic and morphological descriptions for a range of stains, tissue types and pathologies.
Diabetic retinopathy is the leading cause of blindness in the working-age population of the developed world. It is estimated to affect over 93 million people.
VinDr-CXR is an open large-scale dataset of chest X-rays with radiologist’s annotations. It's bult from more than 100,000 raw images in DICOM format that were retrospectively collected from the Hospital 108 and the Hanoi Medical University Hospital, two of the largest hospitals in Vietnam. The published dataset consists of 18,000 postero-anterior (PA) view CXR scans that come with both the localization of critical findings and the classification of common thoracic diseases. These images were annotated by a group of 17 radiologists with at least 8 years of experience for the presence of 22 critical findings (local labels) and 6 diagnoses (global labels); each finding is localized with a bounding box. The local and global labels correspond to the “Findings” and “Impressions” sections, respectively, of a standard radiology report.
4D-OR includes a total of 6734 scenes, recorded by six calibrated RGB-D Kinect sensors 1 mounted to the ceiling of the OR, with one frame-per-second, providing synchronized RGB and depth images. We provide fused point cloud sequences of entire scenes, automatically annotated human 6D poses and 3D bounding boxes for OR objects. Furthermore, we provide SSG annotations for each step of the surgery together with the clinical roles of all the humans in the scenes, e.g., nurse, head surgeon, anesthesiologist.
The SD-198 dataset contains 198 different diseases from different types of eczema, acne and various cancerous conditions. There are 6,584 images in total. A subset include the classes with more than 20 image samples, namely SD-128."
The MM-WHS 2017 dataset is a dataset for multi-modality whole heart segmentation. It provides 20 labeled and 40 unlabeled CT volumes, as well as 20 labeled and 40 unlabeled MR volumes. In total there are 120 multi-modality cardiac images acquired in a real clinical environment.
We release expert-made scribble annotations for the medical ACDC dataset 1. The released data must be considered as extending the original ACDC dataset. The ACDC dataset contains cardiac MRI images, paired with hand-made segmentation masks. It is possible to use the segmentation masks provided in the ACDC dataset to evaluate the performance of methods trained using only scribble supervision.
ChestX-Det is a chest X-Ray dataset with instance-level annotations (boxes and masks). ChestX-Det is a subset of the public dataset NIH ChestX-ray14. It contains ~3500 images of 13 common disease categories labeled by three board-certified radiologists.
Chinese Medical Named Entity Recognition, a dataset first released in CHIP20204, is used for CMeEE task. Given a pre-defined schema, the task is to identify and extract entities from the given sentence and classify them into nine categories: disease, clinical manifestations, drugs, medical equipment, medical procedures, body, medical examinations, microorganisms, and department.
TMED is a clinically-motivated benchmark dataset for computer vision and machine learning from limited labeled data.
The REFLACX dataset contains eye-tracking data for 3,032 readings of chest x-rays by five radiologists. The dictated reports were transcribed and have timestamps synchronized with the eye-tracking data.
Clinical diagnosis of the eye is performed over multifarious data modalities including scalar clinical labels, vectorized biomarkers, two-dimensional fundus images, and three-dimensional Optical Coherence Tomography (OCT) scans. While the clinical labels, fundus images and OCT scans are instrumental measurements, the vectorized biomarkers are interpreted attributes from the other measurements. Clinical practitioners use all these data modalities for diagnosing and treating eye diseases like Diabetic Retinopathy (DR) or Diabetic Macular Edema (DME). Enabling usage of machine learning algorithms within the ophthalmic medical domain requires research into the relationships and interactions between these relevant data modalities. Existing datasets are limited in that: (i) they view the problem as disease prediction without assessing biomarkers, and (ii) they do not consider the explicit relationship among all four data modalities over the treatment period. In this paper, we introduce the O
GRAZPEDWRI-DX is a public dataset of 20,327 pediatric wrist trauma X-ray images released by the University of Medicine of Graz. These X-ray images were collected by multiple pediatric radiologists at the Department for Pediatric Surgery of the University Hospital Graz between 2008 and 2018, involving 6,091 patients and a total of 10,643 studies. This dataset is annotated with 74,459 image labels, featuring a total of 67,771 labeled objects.
The MedNLI dataset consists of the sentence pairs developed by Physicians from the Past Medical History section of MIMIC-III clinical notes annotated for Definitely True, Maybe True and Definitely False. The dataset contains 11,232 training, 1,395 development and 1,422 test instances. This provides a natural language inference task (NLI) grounded in the medical history of patients.
Mindboggle is a large publicly available dataset of manually labeled brain MRI. It consists of 101 subjects collected from different sites, with cortical meshes varying from 102K to 185K vertices. Each brain surface contains 25 or 31 manually labeled parcels.
A large publicly available retinal fundus image dataset for glaucoma classification called G1020. The dataset is curated by conforming to standard practices in routine ophthalmology and it is expected to serve as standard benchmark dataset for glaucoma detection. This database consists of 1020 high resolution colour fundus images and provides ground truth annotations for glaucoma diagnosis, optic disc and optic cup segmentation, vertical cup-to-disc ratio, size of neuroretinal rim in inferior, superior, nasal and temporal quadrants, and bounding box location for optic disc.
LoDoPaB-CT is a dataset of computed tomography images and simulated low-dose measurements. It contains over 40,000 scan slices from around 800 patients selected from the LIDC/IDRI Database.