Immobilized fluorescently stained zebrafish through the eXtended Field of view Light Field Microscope 2D-3D dataset

Introduced 2023-06-10

This dataset comprises three immobilized fluorescently stained zebrafish imaged through the eXtended Field of view Light Field Microscope (XLFM, also known as Fourier Light Field Microscope). The images were preprocessed with the SLNet, which extracts the sparse signals from the images (a.k.a. the neural activity).

If you intend to use this with Pytorch, you can find a data loader and working source code to load and train networks here.

This dataset is part of the publication: Fast light-field 3D microscopy with out-of-distribution detection and adaptation through Conditional Normalizing Flows.