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Datasets/MIMIC-III

MIMIC-III

The Medical Information Mart for Intensive Care III

MedicalTabularMITIntroduced 2016-05-24

The Medical Information Mart for Intensive Care III (MIMIC-III) dataset is a large, de-identified and publicly-available collection of medical records. Each record in the dataset includes ICD-9 codes, which identify diagnoses and procedures performed. Each code is partitioned into sub-codes, which often include specific circumstantial details. The dataset consists of 112,000 clinical reports records (average length 709.3 tokens) and 1,159 top-level ICD-9 codes. Each report is assigned to 7.6 codes, on average. Data includes vital signs, medications, laboratory measurements, observations and notes charted by care providers, fluid balance, procedure codes, diagnostic codes, imaging reports, hospital length of stay, survival data, and more.

The database supports applications including academic and industrial research, quality improvement initiatives, and higher education coursework.

Source: MIT Laboratory for Computational Biology

Benchmarks

Blood pressure estimation/MAE for SBP [mmHg]Blood pressure estimation/MAE for DBP [mmHg]Blood pressure estimation/Mean Squared Error Blood pressure estimation/MAE Classification/AUC Classification/Macro F1 Classification/Macro Precision Classification/Macro Recall Classification/Micro Precision Classification/Micro Recall Classification/Micro-F1 Classification/P@5 Classification/Precision Classification/Recall Document Text Classification/Micro F1 ECG Classification/MAE for SBP [mmHg]ECG Classification/MAE for DBP [mmHg]ECG Classification/Mean Squared Error ECG Classification/MAE Electrocardiography (ECG)/F1 score Electrocardiography (ECG)/Precision Electrocardiography (ECG)/Recall Electrocardiography (ECG)/Accuracy Electrocardiography (ECG)/MAE for SBP [mmHg]Electrocardiography (ECG)/MAE for DBP [mmHg]Electrocardiography (ECG)/Mean Squared Error Electrocardiography (ECG)/MAE Length-of-Stay prediction/Accuracy (LOS>3 Days)Length-of-Stay prediction/Accuracy (LOS>7 Days)Medical Code Prediction/Micro-F1 Medical Code Prediction/Macro-F1 Medical Code Prediction/Micro-AUC Medical Code Prediction/Macro-AUC Medical Code Prediction/Precision@5 Medical Code Prediction/Precision@8 Medical Code Prediction/Precision@15 Medical Code Prediction/mAP Medical waveform analysis/F1 score Medical waveform analysis/Precision Medical waveform analysis/Recall Medical waveform analysis/Accuracy Medical waveform analysis/MAE for SBP [mmHg]Medical waveform analysis/MAE for DBP [mmHg]Medical waveform analysis/Mean Squared Error Medical waveform analysis/MAE Mortality Prediction/F1 score Mortality Prediction/Precision Mortality Prediction/Recall Mortality Prediction/Accuracy Multi-Label Classification/Micro-F1 Multi-Label Classification/Macro-F1 Multi-Label Classification/Micro-AUC Multi-Label Classification/Macro-AUC Multi-Label Classification/Precision@5 Multi-Label Classification/Precision@8 Multi-Label Classification/Precision@15 Multi-Label Classification/mAP Multi-Label Classification Of Biomedical Texts/Micro F1 Multi-Label Text Classification/AUC Multi-Label Text Classification/Macro F1 Multi-Label Text Classification/Macro Precision Multi-Label Text Classification/Macro Recall Multi-Label Text Classification/Micro Precision Multi-Label Text Classification/Micro Recall Multi-Label Text Classification/Micro-F1 Multi-Label Text Classification/P@5 Multi-Label Text Classification/Precision Multi-Label Text Classification/Recall Multivariate Time Series Forecasting/MSE Multivariate Time Series Forecasting/NegLL Photoplethysmography (PPG)/MAE for SBP [mmHg]Photoplethysmography (PPG)/MAE for DBP [mmHg]Photoplethysmography (PPG)/Mean Squared Error Photoplethysmography (PPG)/MAE Text Classification/AUC Text Classification/Macro F1 Text Classification/Macro Precision Text Classification/Macro Recall Text Classification/Micro Precision Text Classification/Micro Recall Text Classification/Micro-F1 Text Classification/P@5 Text Classification/Precision Text Classification/Recall Time Series Analysis/MSE Time Series Analysis/NegLL Time Series Forecasting/MSE Time Series Forecasting/NegLL

Related Benchmarks

MIMIC-III /Document Text Classification/1:3 Accuracy MIMIC-III /Multi-Label Classification Of Biomedical Texts/1:3 Accuracy MIMIC-III-50/Classification/Micro-F1 MIMIC-III-50/Multi-Label Text Classification/Micro-F1 MIMIC-III-50/Text Classification/Micro-F1

Statistics

Papers: 1,041
Benchmarks: 88

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Tasks

Blood pressure estimation Classification Document Text Classification ECG Classification Electrocardiography (ECG)Length-of-Stay prediction Medical Code Prediction Medical waveform analysis Mortality Prediction Multi-Label Classification Multi-Label Classification Of Biomedical Texts Multi-Label Text Classification Multivariate Time Series Forecasting Photoplethysmography (PPG)Text Classification Time Series Analysis Time Series Forecasting