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SotA/Miscellaneous/De novo molecule generation from MS/MS spectrum (bonus chemical formulae)/MassSpecGym

De novo molecule generation from MS/MS spectrum (bonus chemical formulae) on MassSpecGym

Metric: Top-10 MCES (higher is better)

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#Model↕Top-10 MCES▼Extra DataPaperDate↕Code
1SMILES Transformer52.13NoMassSpecGym: A benchmark for the discovery and i...2024-10-30Code
2Spec2Mol32.6NoMADGEN: Mass-Spec attends to De Novo Molecular g...2025-01-03Code
3MIST + Neuraldecipher31.89Yes---
4MIST + MSNovelist30.13Yes---
5Spec2Mol29.4NoDiffMS: Diffusion Generation of Molecules Condit...2025-02-13Code
6SELFIES Transformer26.87NoMassSpecGym: A benchmark for the discovery and i...2024-10-30Code
7Random chemical generation18.25NoMassSpecGym: A benchmark for the discovery and i...2024-10-30Code
8Madgen16.84NoMADGEN: Mass-Spec attends to De Novo Molecular g...2025-01-03Code
9DiffMS14.73YesDiffMS: Diffusion Generation of Molecules Condit...2025-02-13Code