Protein-Ligand Affinity Prediction on PDBbind

Metric: RMSE (lower is better)

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#	Model↕	RMSE▲	Extra Data	Paper	Date↕	Code
1	PLAPT	1.211	No	-	-	Code
2	PAMNet	1.263	No	A Universal Framework for Accurate and Efficient...	2023-11-19	Code
3	LightGBM	1.316	No	High Performance of Gradient Boosting in Binding...	2022-05-14	-
4	SIGN	1.316	No	Structure-aware Interactive Graph Neural Network...	2021-07-21	Code
5	DimeNet	1.453	No	Structure-aware Interactive Graph Neural Network...	2021-07-21	Code
6	GraphDTA	1.562	No	Structure-aware Interactive Graph Neural Network...	2021-07-21	Code

#1PLAPT
1.211
RMSE
No paperCode
#2PAMNetSOTA
1.263
RMSE· 2023-11-19
A Universal Framework for Accurate and Efficient Geometric Deep Learning of Molecular Systems Code
#3LightGBM
1.316
RMSE· 2022-05-14
High Performance of Gradient Boosting in Binding Affinity Prediction
#4SIGNSOTA
1.316
RMSE· 2021-07-21
Structure-aware Interactive Graph Neural Networks for the Prediction of Protein-Ligand Binding Affinity Code
#5DimeNetSOTA
1.453
RMSE· 2021-07-21
Structure-aware Interactive Graph Neural Networks for the Prediction of Protein-Ligand Binding Affinity Code
#6GraphDTASOTA
1.562
RMSE· 2021-07-21
Structure-aware Interactive Graph Neural Networks for the Prediction of Protein-Ligand Binding Affinity Code