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SotA/Natural Language Processing/Named Entity Recognition (NER)/JNLPBA

Named Entity Recognition (NER) on JNLPBA

Metric: F1 (higher is better)

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#Model↕F1▼Extra DataPaperDate↕Code
1KeBioLM82NoImproving Biomedical Pretrained Language Models ...2021-04-21Code
2BLSTM-CNN-Char (SparkNLP)81.29NoBiomedical Named Entity Recognition at Scale2020-11-12Code
3Spark NLP81.29NoBiomedical Named Entity Recognition at Scale2020-11-12Code
4BINDER80.3NoOptimizing Bi-Encoder for Named Entity Recogniti...2022-08-30Code
5BioMobileBERT80.13NoOn the Effectiveness of Compact Biomedical Trans...2022-09-07Code
6BioLinkBERT (large)80.06NoLinkBERT: Pretraining Language Models with Docum...2022-03-29Code
7DistilBioBERT79.97NoOn the Effectiveness of Compact Biomedical Trans...2022-09-07Code
8CompactBioBERT79.88NoOn the Effectiveness of Compact Biomedical Trans...2022-09-07Code
9PubMedBERT uncased79.1NoDomain-Specific Language Model Pretraining for B...2020-07-31Code
10BioDistilBERT79.1NoOn the Effectiveness of Compact Biomedical Trans...2022-09-07Code
11BioKMNER + BioBERT77.83No--Code
12aimped77.72No---
13BioBERT77.59NoBioBERT: a pre-trained biomedical language repre...2019-01-25Code
14SciFive-Large77.55NoSciFive: a text-to-text transformer model for bi...2021-05-28Code
15BioFLAIR77.03YesBioFLAIR: Pretrained Pooled Contextualized Embed...2019-08-13Code
16MINER77.03NoMINER: Improving Out-of-Vocabulary Named Entity ...2022-04-09Code
17SciBERT (Base Vocab)75.77YesSciBERT: A Pretrained Language Model for Scienti...2019-03-26Code