Metric: F1 (higher is better)
| # | Model↕ | F1▼ | Extra Data | Paper | Date↕ | Code |
|---|---|---|---|---|---|---|
| 1 | BioMegatron | 88.5 | No | BioMegatron: Larger Biomedical Domain Language M... | 2020-10-12 | Code |
| 2 | HGN | 87.86 | No | Hero-Gang Neural Model For Named Entity Recognit... | 2022-05-15 | Code |
| 3 | SciFive-Large | 87.62 | No | SciFive: a text-to-text transformer model for bi... | 2021-05-28 | Code |
| 4 | NCBI_BERT(base) (P) | 86.6 | No | Transfer Learning in Biomedical Natural Language... | 2019-06-13 | Code |
| 5 | BioLinkBERT (large) | 86.39 | No | LinkBERT: Pretraining Language Models with Docum... | 2022-03-29 | Code |
| 6 | KeBioLM | 86.1 | No | Improving Biomedical Pretrained Language Models ... | 2021-04-21 | Code |
| 7 | BioDistilBERT | 85.61 | No | On the Effectiveness of Compact Biomedical Trans... | 2022-09-07 | Code |
| 8 | DistilBioBERT | 85.42 | No | On the Effectiveness of Compact Biomedical Trans... | 2022-09-07 | Code |
| 9 | CompactBioBERT | 85.38 | No | On the Effectiveness of Compact Biomedical Trans... | 2022-09-07 | Code |
| 10 | BioMobileBERT | 84.62 | No | On the Effectiveness of Compact Biomedical Trans... | 2022-09-07 | Code |